PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02489.1.g00030.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 967aa    MW: 102657 Da    PI: 11.0929
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02489.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.21.6e-117978361456
                           AP2  14 rWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                    WvAeIr p++   r+r +lg+f++ae+Aa a+++ + kl+ge
  Zpz_sc02489.1.g00030.1.am.mk 797 GWVAEIRLPRN---RTRLWLGTFDSAEDAAMAYDREAFKLRGE 836
                                   5*******955...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.792779843IPR001471AP2/ERF domain
CDDcd000183.21E-20793844No hitNo description
SMARTSM003801.7E-21794849IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-15796844IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.9E-21797844IPR001471AP2/ERF domain
PfamPF008476.5E-5798836IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 967 aa     Download sequence    Send to blast
MPRYLSNWLL DAGARASARL AENDVVKAWV GRVGGGWYRP ERLRCPPRPT ENMCDVSLSK  60
HGLWIYRAQP PGERKKRHGR HGTRQRGCQL TCCHRKTVAC LETTAGLFWS PGRVALVAVG  120
QALPYLNLVL TSSRRPKLAL ASTSRGGSSL LAYEDAHGSI IDSFLCGVHV DVLRASGRPQ  180
PKSSRHSQKR AHTASSGKVN ALPAPPAYVA TADRSERARN RSALGSTAPT ATARAGRLCA  240
RGCAVAATST TQTIQCRKGS GCGRTGRPRT PSCLTAVAGE GGWAVSAPVS FPSSLATPTD  300
VGFCNAIVDF VGSGLGVEEE AKISGASSWS RPFAGRRKRC HAGAEVRVML PKGEVRSMPL  360
RRPISSFSSY LIGKNMELSP ALGGHTSRIR RTPITVVASN HIVLGGGGGY RRTAALRLRI  420
GCRNRAGVRS YGRRPESVDV DDIYFVRSYA KGGITQAQAL LLPGWLTATG NTPLRFVHAM  480
TCRDQGITTV TGSCGAGHRP GIVSLAHSAA SAPHFFFLSS PNAVMLWHQK QNATTRTPAP  540
RAASGRLPAD RFITGSSFAS PRSKLASASV SLRALAIASI ELEMEGSSGS SDSSGGGTGG  600
AGGRGRRWKG KDITPIQPRR QLAPVIEEAS VASLRPLRKI GRPSDRLQRS ASSLSKYSSS  660
SSAPPSPRSS AISSSAPSGR YIFPFAYEPS TPAGGPLPAW QQSSSASQPA SPQQQKPRPS  720
LQRQGQQMIS FGAPPPQYEA QLLRPESAQQ QQQMLRYWSE ALNLSPRGGQ AGGGVLPSLY  780
QHLMRAPPPP PQKLYRGWVA EIRLPRNRTR LWLGTFDSAE DAAMAYDREA FKLRGENARL  840
NFPDRGRTSA SSAAASAALG AGGSVDKQTT QPLVAASSAQ EGSSSDMAMP HSAEMFHAPM  900
ASGSDWGPAD EACARGLFLH GRFATDEAGM ERSNAQETTA TNAAATGTDM ACDHVPPTPP  960
DTSNFKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1076802e-53AK107680.1 Oryza sativa Japonica Group cDNA clone:002-132-A07, full insert sequence.
GenBankAL6629762e-53AL662976.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence.
GenBankAP0149602e-53AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence.
GenBankCP0126122e-53CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence.
GenBankCR8552302e-53CR855230.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0115K01-H0319F09, complete sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36913268
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.19e-26ERF family protein